Index C | D | G | H | I | J | M | N | O | R | S | T C cell2location() (in module deconvatac.tl) (in module deconvatac.tl.cell2location) cell_type_key (deconvatac.tl.Sampler attribute) (deconvatac.tl.simulate.Sampler attribute) circle_regions() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) conway_maxwell_poisson() (in module deconvatac.tl) (in module deconvatac.tl.simulate) D deconvatac module deconvatac.pp module, [1] deconvatac.pp.feature_selection module deconvatac.pp.reads_to_fragments module deconvatac.tl module, [1] deconvatac.tl.cell2location module deconvatac.tl.destvi module deconvatac.tl.metrics module deconvatac.tl.rctd module deconvatac.tl.simulate module deconvatac.tl.spatialdwls module deconvatac.tl.tangram module define_regions() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) destvi() (in module deconvatac.tl) (in module deconvatac.tl.destvi) G generate_spatial_data() (in module deconvatac.tl) (in module deconvatac.tl.simulate) get_coords() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) gradient_celltype_regions() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) gradient_number_regions() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) H highly_accessible_peaks() (in module deconvatac.pp) (in module deconvatac.pp.feature_selection) highly_variable_peaks() (in module deconvatac.pp) (in module deconvatac.pp.feature_selection) I init_sample_prob() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) J jsd() (in module deconvatac.tl) (in module deconvatac.tl.metrics) M module deconvatac deconvatac.pp, [1] deconvatac.pp.feature_selection deconvatac.pp.reads_to_fragments deconvatac.tl, [1] deconvatac.tl.cell2location deconvatac.tl.destvi deconvatac.tl.metrics deconvatac.tl.rctd deconvatac.tl.simulate deconvatac.tl.spatialdwls deconvatac.tl.tangram N n_regions (deconvatac.tl.Sampler attribute) (deconvatac.tl.simulate.Sampler attribute) num_spots (deconvatac.tl.Sampler attribute) (deconvatac.tl.simulate.Sampler attribute) O obs (deconvatac.tl.Sampler attribute) (deconvatac.tl.simulate.Sampler attribute) R rctd() (in module deconvatac.tl) (in module deconvatac.tl.rctd) reads_to_fragments() (in module deconvatac.pp) (in module deconvatac.pp.reads_to_fragments) reference (deconvatac.tl.Sampler attribute) (deconvatac.tl.simulate.Sampler attribute) region_type (deconvatac.tl.Sampler attribute) (deconvatac.tl.simulate.Sampler attribute) rmse() (in module deconvatac.tl) (in module deconvatac.tl.metrics) S sample_data() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) sample_spots() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) Sampler (class in deconvatac.tl) (class in deconvatac.tl.simulate) spatialdwls() (in module deconvatac.tl) (in module deconvatac.tl.spatialdwls) stripe_regions() (deconvatac.tl.Sampler method) (deconvatac.tl.simulate.Sampler method) T tangram() (in module deconvatac.tl) (in module deconvatac.tl.tangram)