deconvatac.tl.metrics

Functions

rmse(→ float)	Compute RMSE on true and predicted cell type proportions.
jsd(→ float)	Compute Jensen-Shannon divergence on true and predicted cell type proportions.

Module Contents

deconvatac.tl.metrics.rmse(true: pandas.DataFrame | numpy.ndarray, predicted: pandas.DataFrame | numpy.ndarray) → float

Compute RMSE on true and predicted cell type proportions.

Parameters

true

True cell type proportions.

predicted

Predicted cell type proportions.

Returns

Root mean squared error.

deconvatac.tl.metrics.jsd(true: pandas.DataFrame | numpy.ndarray, predicted: pandas.DataFrame | numpy.ndarray) → float

Compute Jensen-Shannon divergence on true and predicted cell type proportions.

Parameters

true

True cell type proportions.

predicted

Predicted cell type proportions.

Returns

Jensen-Shannon divergence.